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| Registros recuperados: 66 | |
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| Gimenes,Marcos A.; Lopes,Catalina R.; Valls,Jose F.M.. |
| Amplified Fragment Length Polymorphism (AFLP) was used to establish the genetic relationships among 20 species from seven of the nine sections of genus Arachis. The level of polymorphism among nine accessions of the cultivated peanut, A. hypogaea L., was also evaluated. Three combinations of primers were used to amplify the AFLPs. The fragments were separated in 6% denaturing acrylamide gels. A total of 408 fragments were analyzed. An average of 135.3 fragments per primer combination were scored, and the largest number of fragments was 169 using primer combination Eco RI - ACC / Mse I - CTG, while the lowest was 108, with Eco RI - ACT / Mse I - CTT. In general, the genetic relationships established using AFLPs agreed with the classification established... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: AFLP; Arachis; Peanut; Taxonomic relationship. |
| Ano: 2002 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572002000300017 |
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| Altinkut,A.; Kazan,K.; Gozukirmizi,N.. |
| The amplified fragment length polymorphism (AFLP) assay is an efficient method for the identification of molecular markers, useful in the improvement of numerous crop species. Bulked Segregant Analysis (BSA) was used to identify AFLP markers associated with water-stress tolerance in barley, as this would permit rapid selection of water-stress tolerant genotypes in breeding programs. AFLP markers linked to water-stress tolerance was identified in two DNA pools (tolerant and sensitive), which were established using selected F2 individuals resulting from a cross between water-stress-tolerant and sensitive barley parental genotypes, based on their paraquat (PQ) tolerance, leaf size, and relative water content (RWC). All these three traits were previously shown... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Bulked segregant analysis; Drought; Hordeum vulgare; AFLP; Paraquat. |
| Ano: 2003 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000100013 |
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| Peres,Ângela Pimenta; Silva-Mann,Renata; Vieira,Maria das Graças G. C.; Machado,José da Cruz. |
| Objetivou-se, com este trabalho, verificar a variabilidade morfocultural e genética de fungos associados à podridão peduncular do mamão (Carica papaya L.). As avaliações morfoculturais foram feitas pelo índice de crescimento micelial e características das colônias, como coloração e tipo de micélio, quando os isolados foram crescidos em diferentes meios de cultura (BDA, MDA e Czapek). A variabilidade genética foi verificada por meio de análises de AFLP. Os isolamentos foram feitos em frutos obtidos de diferentes regiões produtoras do Brasil. Foram estudados oito isolados de cada uma das três espécies mais incidentes (Colletotrichum gloeosporioides, Phoma caricae-papayae e Fusarium solani). Foi verificado que os meios BDA e MDA promoveram um maior e mais... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Colletotrichum gloeosporioides; Phoma caricae-papayae; Fusarium solani; AFLP; Carica papaya. |
| Ano: 2003 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-70542003000500012 |
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| Meyer,Andréia da Silva; Garcia,Antonio Augusto Franco; Souza,Anete Pereira de; Souza Jr.,Cláudio Lopes de. |
| The objective of this study was to evaluate whether different similarity coefficients used with dominant markers can influence the results of cluster analysis, using eighteen inbred lines of maize from two different populations, BR-105 and BR-106. These were analyzed by AFLP and RAPD markers and eight similarity coefficients were calculated: Jaccard, Sorensen-Dice, Anderberg, Ochiai, Simple-matching, Rogers and Tanimoto, Ochiai II and Russel and Rao. The similarity matrices obtained were compared by the Spearman correlation, cluster analysis with dendrograms (UPGMA, WPGMA, Single Linkage, Complete Linkage and Neighbour-Joining methods), the consensus fork index between all pairs of dendrograms, groups obtained through the Tocher optimization procedure and... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Genetic divergence; Heterotic groups; AFLP; RAPD; Multivariate analysis. |
| Ano: 2004 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572004000100014 |
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| Busato,Gustavo R.; Grützmacher,Anderson D.; Oliveira,Antônio C. de; Vieira,Eduardo A.; Zimmer,Paulo D.; Kopp,Maurício M.; Bandeira,Juliana de M.; Magalhães,Taís R.. |
| O objetivo do trabalho foi analisar a estrutura e a diversidade molecular de quatro populações de Spodoptera frugiperda (J.E. Smith) associadas às culturas de milho e arroz no Rio Grande do Sul. Foram coletadas lagartas de quatro populações em áreas isoladas (distanciadas em mais de 300 km) nos municípios de Santa Rosa (milho) e Uruguaiana (arroz irrigado) e em áreas adjacentes, no município de Pelotas (milho e arroz irrigado). A análise de 40 lagartas (10 de cada população), com cinco combinações de oligonucleotídios iniciadores geraram o total de 241 locos, dentre os quais 229 (95%) foram polimórficos. O dendrograma gerado pelo método de agrupamento UPGMA, baseado na matriz de similaridade de Dice, mostrou sobreposições entre as lagartas das populações... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Insecta; Lagarta-do-cartucho; Lagarta-da-folha; AFLP; Biótipo. |
| Ano: 2004 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1519-566X2004000600008 |
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| Pontaroli,Ana Clara; Camadro,Elsa Lucila. |
| Somaclonal variation in plants regenerated by organogenesis from long-term cultured calluses of two diploid staminate genotypes of Asparagus officinalis cv. Argenteuil was characterized by plant phenotype, ploidy, meiotic behavior, pollen viability, fruit and seed set, and AFLP profiles. Phenotypic deviations from the donors were detected in foliage color, flower size, and cladode and flower morphology. Ploidy changes were observed in 37.8% of the 37 regenerants studied. Meiotic alterations in 12 out of 21 regenerants included laggards, dicentric bridges, micronuclei, restitution nuclei and polyads. Of the 408 AFLP markers screened in 43 regenerants and the donors, 2.94% showed polymorphism. High pollen viability was observed in the 22 regenerants... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: AFLP; Fertility; Plant morphology; Meiotic behavior; Ploidy. |
| Ano: 2005 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000300015 |
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| Aguirre,Carlos; Alvarado,Roberto; Hinrichsen,Patricio. |
| Doce cultivares y líneas de arroz (Oryza sativa L.) desarrollados por el programa de fitomejoramiento del Instituto de Investigaciones Agropecuarias (INIA), Centro Regional de Investigación Quilamapu, fueron caracterizados genéticamente mediante amplificación de fragmentos polimórficos (AFLP). De 21 combinaciones ensayadas, sólo 16 fueron informativas, generando un total de 667 amplicones, 94 de ellos polimórficos (14,4%), con un rango entre 9 y 33% de polimorfismo por combinación. Esto indica que el material manejado por el programa de INIA presenta un bajo nivel de diversidad genética comparado tanto con germoplasma silvestre de la especie como con aquel usado por otros programas de fitomejoramiento de la especie. Los amplicones polimórficos detectados... |
| Tipo: Journal article |
Palavras-chave: Diversidad genética; Fingerprinting; AFLP; Pedigrí; Cultivares chilenos de arroz. |
| Ano: 2005 |
URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0365-28072005000400002 |
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| Vieira,Eduardo Alano; Carvalho,Fernando Irajá Félix de; Oliveira,Antônio Costa de; Benin,Giovani; Zimmer,Paulo Dejalma; Silva,José Antônio Gonzalez da; Martins,Andreza Figueirola; Bertan,Ivandro; Silva,Giovani Olegário da; Schmidt,Douglas André Mallman. |
| A estimativa da divergência genética entre cultivares pode ser útil em um programa de melhoramento para o direcionamento de hibridações e o conhecimento do germoplasma disponível. O objetivo do trabalho foi estimar a dissimilaridade genética entre genótipos de aveia (Avena sativa), por meio de marcadores AFLP e do coeficiente de parentesco, e correlacionar essas estimativas entre si e com a estimativa da dissimilaridade genética a partir de caracteres agronômicos em experimentos com e sem a aplicação de fungicida. Onze cultivares de aveia foram utilizadas na estimativa da distância genética a partir de marcadores AFLP. Desses 11 genótipos, nove foram avaliados no campo em experimento com e sem fungicida, para a estimativa da divergência genética a partir... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Aveia-branca; Divergência genética; AFLP; Coeficiente de parentesco; Distância fenotípica. |
| Ano: 2005 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052005000100006 |
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| Murtaza,Naveed. |
| Amplified fragmentlength polymorphism (AFLP) markers have been used to ascertain the intensity of inherent diversity and relatedness in cotton (Gossypium spp.) plants. The effectiveness of this method to distinguish inter and intra specific difference in cotton could be handy in cultivar recognition and in marker assisted parental selection tool for plant breeders. Twenty cotton cultivars belonging to Gossypium hirsutum L., and G. arborium L. from the Pakistan and US origin were used for AFLP based genetic diversity estimates. The objective of this study was to assess the level of genetic variation among some cotton cultivars belonging to the old and new world species of cotton. Four EcoRI-MseI primer-pair combinations were used forthe AFLP analysis. The... |
| Tipo: Journal article |
Palavras-chave: AFLP; Cluster analysis; Cotton; Genetic diversity; PCR. |
| Ano: 2006 |
URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582006000400013 |
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| Shinya,Luciane Tieko; Baccaro,Maria Regina; Moreno,Andrea Micke. |
| Clostridium perfringens is an important pathogen in human and veterinary medicine. In swine, the agent is responsible for necrotic enteritis and enterotoxemia characterized by diarrhea, weight loss, delayed development and, in some cases, death. In the present study amplified fragment length polymorphism analyses (AFLP) was used to characterize 54 C. perfringens strains isolated from swine presenting diarrhea. Analysis of the results showed 29 distinct profiles with discriminatory index equal to 0.97. Partial correlation between the origin of the isolates and groups was drawn, and correlation was possible in only 18.5% of the samples. Characterization of the strains in biotypes (A, B, C, D and E), production of beta-2 toxin and enterotoxin were performed... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: AFLP; Diarrhea; Piglets; Clostridium perfringens. |
| Ano: 2006 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822006000300034 |
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| Ali,Ghulam M; Yasumoto,Sirato; Seki-Katsuta,Masumi. |
| Sesame (Sesamum indicum L.) is one of the oldest oil crops and is widely cultivated in Asia and Africa. To determine the level of genetic diversity in relation to geographical origins and morphological characteristics, a total of 96 accessions have been collected from different parts of the world and were analyzed using AFLP techniques. Twenty-one primer pairs generated a total of 445 bands and among them 157 (35%) were polymorphic. Using UPGMA clustering analysis method based on the similarity coefficient, accessions were separated into two major groups. The first group mostly consists of Eastern Asian origin and another group consists of South Asian origin. Sub-clusters separated the accessions and form distinct diversity among groups. Considering the... |
| Tipo: Journal article |
Palavras-chave: AFLP; Genetic diversity; Geographical origin; Morphology; Sesame. |
| Ano: 2007 |
URL: http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582007000100002 |
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| Lallias, Delphine; Beaumont, A.r.; Haley, C.s.; Boudry, Pierre; Heurtebise, Serge; Lapegue, Sylvie. |
| This study presents the first genetic linkage map for the European flat oyster Ostrea edulis. AFLP and 20 microsatellite markers were genotyped in a three-generation pedigree comprised of 2 grand-parents, 2 parents and 92 progeny. Chi-square goodness of fit tests revealed high segregation distortion, which was significant for 32.8% of markers. Sixteen microsatellites and 235 AFLPs (170 AFLPs type 1:1 and 65 AFLPs type 3:1) were used to build sex-specific linkage maps using CriMap software. The first parental map (P1) consisted of 104 markers grouped in nine linkage groups, spanning 471.2 cM with an average spacing of 4.86 cM. The second parental map (P2) consisted of 117 markers grouped in ten linkage groups (which equals the haploid chromosome number),... |
| Tipo: Text |
Palavras-chave: Microsatellite; AFLP; Ostrea edulis; Flat oyster; Genetic linkage map. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/publication-2642.pdf |
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| Lallias, Delphine; Lapegue, Sylvie; Hecquet, Celine; Boudry, Pierre; Beaumont, A. |
| We report the construction of the first genetic linkage map in the blue mussel, Mytilus edulis. AFLP markers were used in 86 full-sib progeny from a controlled pair mating, applying a double pseudo-test cross strategy. Thirty-six primer pairs generated 2354 peaks, of which 791 (33.6%) were polymorphic in the mapping family. Among those, 341 segregated through the female parent, 296 through the male parent (type 1:1) and 154 through both parents (type 3:1). Chi-square goodness-of-fit tests revealed that 71% and 73% of type 1:1 and 3:1 markers respectively segregated according to Mendelian inheritance. Sex-specific linkage maps were built with mapmaker 3.0 software. The female framework map consisted of 121 markers ordered into 14 linkage groups, spanning... |
| Tipo: Text |
Palavras-chave: Mytilus edulis; Genetic linkage map; Blue mussel; AFLP. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/publication-2830.pdf |
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| Lallias, Delphine; Hecquet, Céline; Boudry, Pierre; Lapegue, Sylvie; Beaumont, Andy. |
| The blue mussel, Mytilus edulis, is widely distributed in the northern hemisphere, from the White Sea to the Atlantic coast of southern France, and is an economically important species (1 million tons per year, FAO, 2002). At present however, little domestication has been achieved with bivalves, in contrast to agricultural crops, livestock and horticultural species like tomatoes, where selection and production is entirely controlled by man. For bivalves, despite their economic importance, no lines with selected characteristics have been taken to the production scale. There is therefore a need to make up for lost time. Our interest in genetic mapping sprang from some results showing a genetic component to some economically important traits like growth and... |
| Tipo: Text |
Palavras-chave: QTLs; AFLP; Genetic; Mussel; Mytilus edulis; Genetic linkage map. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/acte-3465.pdf |
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| Lallias, Delphine. |
| Genetic linkage maps consist of ordering molecular markers across the genome and require a high number of markers for a good coverage of the genome. Such maps represent a framework which enables the identification and localisation of Quantitative Trait Loci (QTLs) for traits of interest, such as growth or disease resistance, with the final aim of achieving genetic improvement through marker-assisted selection (MAS). Data on bivalves are scarce. No genetic map has yet been constructed in any mussel or flat oyster species. We report construction of a preliminary genetic linkage map in the blue mussel, Mytilus edulis (n=14). Amplified Fragment Length Polymorphism (AFLP) markers were used in a mapping family containing 86 full-sibs issued from a controlled... |
| Tipo: Text |
Palavras-chave: Microsatellite; AFLP; Mussel; Flat oyster; QTL; Genetic mapping; Microsatellite; AFLP; Moule; Huître plate; QTL; Cartographie génétique. |
| Ano: 2007 |
URL: http://archimer.ifremer.fr/doc/2007/these-2603.pdf |
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| Registros recuperados: 66 | |
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